Tim joined my lab as a Ph.D. student from 2015 to 2019.
Tim has been the key architect of LINDSAY Composer, the game development engine that has driven the first physiology applications of the LINDSAY Virtual Human project.
As the highlight of his Ph.D. research, Tim implemented LifeBrush: An Illustrative Simulation Canvas for the Biological Mesoscale.
Publications:
- Davison, Timothy; Samavati, Faramarz F; Jacob, Christian LifeBrush: Painting Interactive Agent-based Simulations Conference 2018 International Conference on Cyberworlds (CW), IEEE 2018.
- Wu, Andrew; Davison, Timothy; Jacob, Christian A 3D Multiscale Model of Chemotaxis in Bacteria Inproceedings Proceedings of the Artificial Life Conference 2016, pp. 546–553, MIT Press, Cambridge, MA, 2016.
- Esmaeili, Afshin ; Davison, Timothy ; Wu, Andrew ; Alcantara, Joenel ; Jacob, Christian PROKARYO: an illustrative and interactive computational model of the lactose operon in the bacterium Escherichia coli Journal Article BMC bioinformatics, 16 (1), pp. 311, 2015.
- Shirazi, Abbas Sarraf ; Davison, Timothy ; von Mammen, Sebastian ; Denzinger, J{“o}rg ; Jacob, Christian Adaptive agent abstractions to speed up spatial agent-based simulations Journal Article Simulation Modelling Practice and Theory, 40 , pp. 144–160, 2014.
- Von Mammen, Sebastian ; Phillips, David ; Davison, Timothy ; Jamniczky, Heather ; Hallgr{‘i}msson, Benedikt ; Jacob, Christian Swarm-based computational development Incollection Morphogenetic Engineering, pp. 473–499, Springer, 2012.
- von Mammen, Sebastian; Davison, Timothy ; Baghi, Hamid ; Jacob, Christian Component-Based Networking for Simulations in Medical Education Conference MediaWiN 2010: 5th IEEE Workshop on multiMedia Applications over Wireless Networks, Ricione, Italy, 2010.
- Davison, Timothy ; von Mammen, Sebastian ; Jacob, Christian
- Evoshelf: a system for managing and exploring evolutionary data Inproceedings International Conference on Parallel Problem Solving from Nature, pp. 310–319, Springer 2010.
- von Mammen, Sebastian; Phillips, David ; Davison, Timothy ; Jacob, Christian
- Swarm Graph Grammars: A Scale-independent, Graph-based Multi-agent Representation Conference ANTS 2010 – 7th International Conference on Swarm Intelligence, Brussels, Belgium, 2010.